Just edit your pins.h
In more detail.
In configuration.h you set motherboard = 33
Find that in pins.h starts at [github.com]
The extruder pins are defined [github.com]
so take
#define E0_STEP_PIN 26
#define E0_DIR_PIN 28
#define E0_ENABLE_PIN 24
#define E1_STEP_PIN 36
#define E1_DIR_PIN 34
#define E1_ENABLE_PIN 30
and make it
#define E0_STEP_PIN 36
#define E0_DIR_PIN 34
#define E0_ENABLE_PIN 30
#define E1_STEP_PIN 26
#define E1_DIR_PIN 28
#define E1_ENABLE_PIN 24
Save, compile and upload.
Now E1 and E0 are swapped over.
In more detail.
In configuration.h you set motherboard = 33
Find that in pins.h starts at [github.com]
The extruder pins are defined [github.com]
so take
#define E0_STEP_PIN 26
#define E0_DIR_PIN 28
#define E0_ENABLE_PIN 24
#define E1_STEP_PIN 36
#define E1_DIR_PIN 34
#define E1_ENABLE_PIN 30
and make it
#define E0_STEP_PIN 36
#define E0_DIR_PIN 34
#define E0_ENABLE_PIN 30
#define E1_STEP_PIN 26
#define E1_DIR_PIN 28
#define E1_ENABLE_PIN 24
Save, compile and upload.
Now E1 and E0 are swapped over.