Motors inconsistent jogging in positve direction

I have replaced the ramps based board on my Leapfrog Creatr to a Rambo 1.2 with LCD. Setting up the new board was going well until I noticed that the X and Y motors were not turning consistently when jogged in the positive direction. They move correctly when jogged in the negative direction. The Z axis moves perfect in both directions. I have tried playing with the current settings as well as swapping out motors and cables, but nothing seems to be working. I also tried to reduce the acceleration, but that did not work either.

Is there any other settings that I can adjust that might fix this problem? I find it really weird that this problem only occurs in the positive direction.